blast result Search Results


blast results  (InterPro Inc)
90
InterPro Inc blast results
Blast Results, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/blast results/product/InterPro Inc
Average 90 stars, based on 1 article reviews
blast results - by Bioz Stars, 2026-06
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snps with many blast results  (INFINIUM Inc)
90
INFINIUM Inc snps with many blast results
<t>Only</t> <t>SNPs</t> with a significant <t>BLAST</t> result on the expected chromosome were considered (N=17,250).
Snps With Many Blast Results, supplied by INFINIUM Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/snps with many blast results/product/INFINIUM Inc
Average 90 stars, based on 1 article reviews
snps with many blast results - by Bioz Stars, 2026-06
90/100 stars
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87.0 blast results  (InterPro Inc)
90
InterPro Inc 87.0 blast results
<t>Only</t> <t>SNPs</t> with a significant <t>BLAST</t> result on the expected chromosome were considered (N=17,250).
87.0 Blast Results, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/87.0 blast results/product/InterPro Inc
Average 90 stars, based on 1 article reviews
87.0 blast results - by Bioz Stars, 2026-06
90/100 stars
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blast results  (Wageningen University and Research)
90
Wageningen University and Research blast results
<t>Only</t> <t>SNPs</t> with a significant <t>BLAST</t> result on the expected chromosome were considered (N=17,250).
Blast Results, supplied by Wageningen University and Research, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/blast results/product/Wageningen University and Research
Average 90 stars, based on 1 article reviews
blast results - by Bioz Stars, 2026-06
90/100 stars
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sequence assembly from blast results  (MacVector inc)
90
MacVector inc sequence assembly from blast results
<t>Only</t> <t>SNPs</t> with a significant <t>BLAST</t> result on the expected chromosome were considered (N=17,250).
Sequence Assembly From Blast Results, supplied by MacVector inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/sequence assembly from blast results/product/MacVector inc
Average 90 stars, based on 1 article reviews
sequence assembly from blast results - by Bioz Stars, 2026-06
90/100 stars
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transcriptome_blast_results_read_counts  (TranScrip Partners)
90
TranScrip Partners transcriptome_blast_results_read_counts
<t>Only</t> <t>SNPs</t> with a significant <t>BLAST</t> result on the expected chromosome were considered (N=17,250).
Transcriptome Blast Results Read Counts, supplied by TranScrip Partners, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/transcriptome_blast_results_read_counts/product/TranScrip Partners
Average 90 stars, based on 1 article reviews
transcriptome_blast_results_read_counts - by Bioz Stars, 2026-06
90/100 stars
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blast comparison results  (Sangon Biotech)
86
Sangon Biotech blast comparison results
<t>Only</t> <t>SNPs</t> with a significant <t>BLAST</t> result on the expected chromosome were considered (N=17,250).
Blast Comparison Results, supplied by Sangon Biotech, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/blast comparison results/product/Sangon Biotech
Average 86 stars, based on 1 article reviews
blast comparison results - by Bioz Stars, 2026-06
86/100 stars
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blast result  (Macrogen)
86
Macrogen blast result
<t>Only</t> <t>SNPs</t> with a significant <t>BLAST</t> result on the expected chromosome were considered (N=17,250).
Blast Result, supplied by Macrogen, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/blast result/product/Macrogen
Average 86 stars, based on 1 article reviews
blast result - by Bioz Stars, 2026-06
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Image Search Results


Only SNPs with a significant BLAST result on the expected chromosome were considered (N=17,250).

Journal: bioRxiv

Article Title: Integration of Infinium and Axiom SNP array data in the outcrossing species Malus × domestica and causes for seemingly incompatible calls

doi: 10.1101/2020.09.01.276758

Figure Lengend Snippet: Only SNPs with a significant BLAST result on the expected chromosome were considered (N=17,250).

Article Snippet: However, this trend was only observed across a small number of SNPs, as only few SNPs with many BLAST results passed the Infinium data curation step.

Techniques:

Three different stringency thresholds for a successful BLAST result were used: 1E-12, 1E-14, and 1E-16. The number of SNPs within each group is listed in the included table. Higher numbers of BLAST results were grouped together because of the diminishing number of SNPs that had higher numbers of BLAST results.

Journal: bioRxiv

Article Title: Integration of Infinium and Axiom SNP array data in the outcrossing species Malus × domestica and causes for seemingly incompatible calls

doi: 10.1101/2020.09.01.276758

Figure Lengend Snippet: Three different stringency thresholds for a successful BLAST result were used: 1E-12, 1E-14, and 1E-16. The number of SNPs within each group is listed in the included table. Higher numbers of BLAST results were grouped together because of the diminishing number of SNPs that had higher numbers of BLAST results.

Article Snippet: However, this trend was only observed across a small number of SNPs, as only few SNPs with many BLAST results passed the Infinium data curation step.

Techniques:

The inclusion rate of Infinium data is represented by black and the compatibility of these included SNPs with Axiom data with and without class C SNPs (those with additional heterozygous cluster(s) in Axiom cluster plots requiring manual adjustment to make compatible) being classified as compatible are represented by pink and blue, respectively. The horizontal lines represent the inclusion and compatibility rates for SNPs with no identified secondary polymorphisms at their probe site for the three respective data sources that sized 6,632 (black), 6,011 (pink), and 6,011 (blue) SNPs. SNPs included in this analysis had their alternate allele present in at least 10% of the sequenced individuals, had no more than 25% missing data across the sequenced individuals, and had probe sequence with a single BLAST result on the GDDH13 WGS with an E-value <1E-12.

Journal: bioRxiv

Article Title: Integration of Infinium and Axiom SNP array data in the outcrossing species Malus × domestica and causes for seemingly incompatible calls

doi: 10.1101/2020.09.01.276758

Figure Lengend Snippet: The inclusion rate of Infinium data is represented by black and the compatibility of these included SNPs with Axiom data with and without class C SNPs (those with additional heterozygous cluster(s) in Axiom cluster plots requiring manual adjustment to make compatible) being classified as compatible are represented by pink and blue, respectively. The horizontal lines represent the inclusion and compatibility rates for SNPs with no identified secondary polymorphisms at their probe site for the three respective data sources that sized 6,632 (black), 6,011 (pink), and 6,011 (blue) SNPs. SNPs included in this analysis had their alternate allele present in at least 10% of the sequenced individuals, had no more than 25% missing data across the sequenced individuals, and had probe sequence with a single BLAST result on the GDDH13 WGS with an E-value <1E-12.

Article Snippet: However, this trend was only observed across a small number of SNPs, as only few SNPs with many BLAST results passed the Infinium data curation step.

Techniques: Sequencing